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Fig. 2 | BMC Bioinformatics

Fig. 2

From: ATLAS: a Snakemake workflow for assembly, annotation, and genomic binning of metagenome sequence data

Fig. 2

Example output from the ATLAS workflow. Fecal microbiome data (PRJNA480387 [40];) processed by ATLAS show: A) the completeness and contamination of dereplicated MAGs, with high-quality genomes highlighted; B) the fraction of reads mapped to genomes; C) a phylogenetic tree of MAGs with average abundance in feces and cecum on a centered log2 scale; D) a heatmap of abundance on a centered log2 scale in which MAGs were clustered by phylogenetic distance and samples by Euclidian distance; E) a principle components analysis of the MAGs based on functional annotation

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BMC Bioinformatics

ISSN: 1471-2105

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