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Table 3 SLFinder steps performance for all datasets

From: SLFinder, a pipeline for the novel identification of splice-leader sequences: a good enough solution for a complex problem

Data Set

Step0

Step1

Step2

Step3

Total

A. aerophoba

32 m 12 s

0 m 34 s

X

X

32 m 46 s

C. elegans

4 m 23 s

0 m 24 s

13 m 25 s

1 m 08 s

19 m 46 s

C. intestinalis

4 m 29 s

1 m 54 s

0 m 03 s

0 m 43 s

7 m 09 s

D. melanogaster

5 m 36 s

0 m 20s

X

X

5 m 56 s

H. vulgaris

15 m 17 s

57 m 26 s

19 m 58 s

14 m 35 s

1 h 47 m 16 s

M. musculus

7 m 14 s

2 m 10s

X

X

7 m 24 s

S. glomerata

24 m 24 s

0 m 25 s

X

X

24 m 59 s

S. mansoni

6 m 53 s

0 m 38 s

0 m 06 s

3 m 03 s

10 m 40s