Skip to main content

Table 3 SLFinder steps performance for all datasets

From: SLFinder, a pipeline for the novel identification of splice-leader sequences: a good enough solution for a complex problem

Data Set Step0 Step1 Step2 Step3 Total
A. aerophoba 32 m 12 s 0 m 34 s X X 32 m 46 s
C. elegans 4 m 23 s 0 m 24 s 13 m 25 s 1 m 08 s 19 m 46 s
C. intestinalis 4 m 29 s 1 m 54 s 0 m 03 s 0 m 43 s 7 m 09 s
D. melanogaster 5 m 36 s 0 m 20s X X 5 m 56 s
H. vulgaris 15 m 17 s 57 m 26 s 19 m 58 s 14 m 35 s 1 h 47 m 16 s
M. musculus 7 m 14 s 2 m 10s X X 7 m 24 s
S. glomerata 24 m 24 s 0 m 25 s X X 24 m 59 s
S. mansoni 6 m 53 s 0 m 38 s 0 m 06 s 3 m 03 s 10 m 40s