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Table 1 Analysis results of the real metagenome (SRR1804065) at species level

From: Metagenomic analysis through the extended Burrows-Wheeler transform

SRR1804065 Reads % Reads % Reads %
  assigned at   assigned at   unassigned  
  species level   higher rank    
LiMEeBWT 4,524,097 80.007 1,019,702 18.033 110,825 1.960
α=16, β=0.25       
LiMEDA 4,563,319 80.701 991,361 17.532 99,944 1.767
α=16, β=0.25       
Kraken 2 4,497,709 79.540 1,085,413 19.195 71,502 1.264
taxMaps 4,331,521 76.601 1,240,035 21.930 83,068 1.469
CLARK-S 4,414,957 78.077 0 0 1,239,667 21.923
Centrifuge 4,461,655 78.903 1,170,321 20.697 22,648 0.401
Magic-BLAST 4,392,446 77.679 1,081,523 19.126 180,655 3.195
  1. Best scores are in bold