Table 7 Number of DMRs and gene percentages found when all the tools yield similar number of genes with DMRs
From: HPG-DHunter: an ultrafast, friendly tool for DMR detection and visualization
BSmooth | DSS-Single | methylKit | HPG-DHunter | |
|---|---|---|---|---|
A-Total DMRs | 7006 | 4552 | 13181 | 5374 |
B-DMRs in genes | 3674 | 2368 | 6519 | 2493 |
C-genes with DMRs | 1229 | 1536 | 1539 | 1605 |
%DMRs in Genes(B/A) | 52.44 | 52.02 | 49.46 | 46.39 |
%Genes in DMRs total(C/A) | 17.54 | 33.74 | 11.68 | 29.87 |
%Genes in (DMRs in gen)(C/B) | 33.45 | 64.86 | 23.61 | 64.38 |