From: A rank-based marker selection method for high throughput scRNA-seq data
General procedure | Methods | Metrics |
---|---|---|
Supervised classification | Nearest centroid classifier (NCC)Random forests classifier (RFC) | Classification error (1 - accuracy) |
Average precision | ||
Matthews correlation coefficient | ||
Unsupervised clustering | Louvain clustering | Adjusted rand index (ARI) |
Adjusted mutual information (AMI) | ||
Fowlkes-Mallows score (FMS) |