Fig. 4
From: A performant bridge between fixed-size and variable-size seeding
Correctness rate (CR) analysis. a) The figure visualizes Def. 1. The green seeds are contributing seeds (belong to the accurate alignment) and the red seeds are not contributing. For this example n = n1 + n2 and |S| = 6. b) analyzes the CR of CCS PacBio reads for (10, 19)-minimizer, MEMs, SMEMs and maximal spanning seeds. Each point in the diagram shows an average value for 1000 reads with an occurrence filter set to 2000. c) visualizes the rate of CR over the runtime, where the benchmarking environment is equal to b)