Table 2 Comparison of the results of the clonotype computation process using the Galaxy and the TRIP tools

T3396 GALAXY

T3396 TRIP

V-GENE

AA JUNCTION

Frequency %

V-GENE

AA JUNCTION

Frequency %

TRBV4-1

CASSTTGTVDEKLFF

8.4826

TRBV4-1

CASSTTGTVDEKLFF

8.5093

TRBV12-3

CASSPNYSNQPQHF

3.5982

TRBV12-3

CASSPNYSNQPQHF

3.6485

TRBV5-4

CASSLGGTGELFF

2.4546

TRBV5-4

CASSLGGTGELFF

2.4594

TRBV20-1

CSARDGRDLEAQHF

1.9461

TRBV20-1

CSARDGRDLEAQHF

1.9503

TRBV19

CASSPRGFNTGELFF

1.3321

TRBV19

CASSPRGFNTGELFF

1.3341

TRBV4-1

CASSQRQGITGELFF

0.9452

TRBV4-1

CASSQRQGITGELFF

0.9471

TRBV11-1

CASSFWAGNTGELFF

0.7768

TRBV11-1

CASSFWAGNTGELFF

0.7780

TRBV27

CASSFTSAGELFF

0.7753

TRBV27

CASSFTSAGELFF

0.7737

TRBV29-1

CSVGGSGGTGYTF

0.6066

TRBV29-1

CSVGGSGGTGYTF

0.6064

TRBV27

CASRLGQAYGYTF

0.5531

TRBV27

CASRLGQAYGYTF

0.5483

Top10 cumumative frequency

21.4706

21.5567

T3397 GALAXY

T3397 TRIP

V-GENE

AA JUNCTION

Frequency %

V-GENE

AA JUNCTION

Frequency %

TRBV4-1

CASSTTGTVDEKLFF

14.8369

TRBV4-1

CASSTTGTVDEKLFF

14.8632

TRBV19

CASSPRGFNTGELFF

6.4774

TRBV19

CASSPRGFNTGELFF

6.4848

TRBV12-3

CASSPNYSNQPQHF

4.1264

TRBV12-3

CASSPNYSNQPQHF

4.1631

TRBV5-1

CASSPSKGQGGTGELFF

2.1106

TRBV5-1

CASSPSKGQGGTGELFF

2.1095

TRBV13

CASSSDDSPLHF

2.0741

TRBV13

CASSSDDSPLHF

2.0747

TRBV4-1

CASSQRQGITGELFF

2.0391

TRBV4-1

CASSQRQGITGELFF

2.0449

TRBV12-5

CASGDTGAGNTIYF

1.7406

TRBV12-5

CASGDTGAGNTIYF

1.7404

TRBV20-1

CSARDGRDLEAQHF

1.6190

TRBV20-1

CSARDGRDLEAQHF

1.6226

TRBV10-2

CASSLDGMNYGYTF

1.3040

TRBV10-2

CASSLDGMNYGYTF

1.3026

TRBV7-6

CASSPRQGRNEKLFF

1.0923

TRBV7-6

CASSPRQGRNEKLFF

1.0942

Top10 cumumative frequency

37.4204

37.5006

T3404 GALAXY

T3404 TRIP

V-GENE

AA JUNCTION

Frequency %

V-GENE

AA JUNCTION

Frequency %

TRBV28

CASSPPDTGELFF

23.0765

TRBV28

CASSPPDTGELFF

23.0543

TRBV7-2

CASRGGLYQPQHF

11.0932

TRBV7-2

CASRGGLYQPQHF

11.1012

TRBV29-1

CSVEDGQGPYSGNTIYF

2.1361

TRBV29-1

CSVEDGQGPYSGNTIYF

2.1345

TRBV18

CASSPTGGDSPLHF

0.9294

TRBV18

CASSPTGGDSPLHF

0.9273

TRBV15

CATSREGGEKLFF

0.7032

TRBV15

CATSREGGEKLFF

0.7040

TRBV5-1

CASSRSPLGTRDEQYF

0.6939

TRBV5-1

CASSRSPLGTRDEQYF

0.6935

TRBV15

CATSRDGQEYQPQHF

0.6661

TRBV15

CATSRDGQEYQPQHF

0.6641

TRBV29-1

CSVGGRLVGELFF

0.5738

TRBV29-1

CSVGGRLVGELFF

0.5746

TRBV15

CATSRDTLLAGEGGELFF

0.4378

TRBV15

CATSRDTLLAGEGGELFF

0.4372

TRBV29-1

CSVEYPGNGYTF

0.3101

TRBV29-1

CSVEYPGNGYTF

0.3099

Top10 cumumative frequency

40.6201

40.6008