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Fig. 5 | BMC Bioinformatics

Fig. 5

From: RiboMiner: a toolset for mining multi-dimensional features of the translatome with ribosome profiling data

Fig. 5

Comparison of the ribosome densities among different amino acids and codons. a Relative ribosome density on each amino acid for the sample of si-eIF5A. b Relative ribosome densities on different codons for the si-eIF5A sample. c The ratio (log2) of ribosome densities for each amino acid in the sample of si-eIF5A over si-Ctrl. d The ratio (log2) of ribosome densities for each codon in the sample of si-eIF5A over si-Ctrl. All the analyses above were based on the 2954 up-regulated transcripts. Ribosome densities were calculated with reads aligned by their P-sites

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BMC Bioinformatics

ISSN: 1471-2105

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