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Fig. 8 | BMC Bioinformatics

Fig. 8

From: Spark-based parallel calculation of 3D fourier shell correlation for macromolecule structure local resolution estimation

Fig. 8

The K-V format based optimized fine-grained 3D array partition algorithm in Spark for 3D local resolution estimation. TB stand for triple block, TB=(x,y,z), where x, y, z is start coordinate of window traversing density map. 0, c, d, k are partition number, and 0 ≤ c ≤ d ≤k, k is the largest partition number. List of sequence numbering and start coordinates of window traversing are transformed into RDD. 3D sub-array pair are acquired by cutting 3D array using each partition data and side length of window, and calculated for gaining 3D local FSC and resolution

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BMC Bioinformatics

ISSN: 1471-2105

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