Table 4 Top ten significantly deleted and amplified genes in tumor samples of 510 patients with LUAD. After gene enrichment analysis, the significantly amplified and deleted genes were listed with their aberration type, q value, genomic aberration region and gene region on specified chromosomes

AL359821.1

Del

1:71621685–71778398

1:71738173–71738354

GDI2P2

Del

1:71928758–119984738

1:72274552–72275159

AL513166.2

Del

1:71928758–119984738

1:72283170–72753772

RPL31P12

Del

1:71928758–119984738

1:72301472–72301829

AL583808.1

Del

1:71928758–119984738

1:72636547–72899240

RNU6-1246P

Del

1:71928758–119984738

1:72717663–72717769

AL583808.2

Del

1:71928758–119984738

1:72765031–72791282

AL583808.3

Del

1:71928758–119984738

1:72793104–72854475

AL732618.1

Del

1:71928758–119984738

1:72979014–72979314

KRT8P21

Del

1:71928758–119984738

1:73104792–73106282

SF3B4

Amp

1:149907993–247650984

1:149923317–149927803

MTMR11

Amp

1:149907993–247650984

1:149928651–149936879

OTUD7B

Amp

1:149907993–247650984

1:149937812–150010726

AC244033.2

Amp

1:149907993–247650984

1:150045660–150067701

AC244033.1

Amp

1:149907993–247650984

1:150053864–150055034

VPS45

Amp

1:149907993–247650984

1:150067279–150145329

PLEKHO1

Amp

1:149907993–247650984

1:150149183–150164720

AC242988.2

Amp

1:149907993–247650984

1:150173049–150181429

RN7SL480P

Amp

1:149907993–247650984

1:150211632–150211925

ANP32E

Amp

1:149907993–247650984

1:150218417–150236156