From: smsMap: mapping single molecule sequencing reads by locating the alignment starting positions
Datasets | smsMap | lordFAST | BLASR | BWA-MEM | GraphMapa | minimap2 | NGLMR | |
---|---|---|---|---|---|---|---|---|
std | E. coli | 5.73E-5 | 0.09208 | 0.15266 | 0.15370 | 0.04106 | 0.14725 | 0.14089 |
A. thaliana | 0.01653 | 0.13360 | 0.19902 | 0.20301 | 0.01688 | 0.19362 | 0.15433 | |
C. elegans | 0.00466 | 0.18524 | 0.14132 | 0.15507 | 0.01775 | 0.14245 | 0.14936 | |
H. sapiens | 0.00001 | 0.14932 | 0.17926 | 0.16256 | – | 0.14897 | 0.17192 |