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Table 3 The overlap between the top 322 gene-gene associations in the MBSC dataset and the top 1,600 gene-gene associations in the MMC dataset for each network method. Reference networks were created by the STRING database

From: A sparse Bayesian factor model for the construction of gene co-expression networks from single-cell RNA sequencing count data

 

MBSC reference set

  

MMC reference set

 

High

Medium

Low

High

Medium

Low

HBFM, F=25

19

50

113

618

707

926

LEAP

19

45

100

263

357

678

PIDC

13

40

95

460

559

838

SCODE

9

27

74

167

247

517

BN

12

40

96

384

474

783

GENIE3

12

38

94

338

434

733

PCORR

14

40

102

263

346

582

Reference total

42

116

322

697

897

1600

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BMC Bioinformatics

ISSN: 1471-2105

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