Table 1 Branch length comparison between the traced skeleton branches and optimized skeleton branches
From: Skeleton optimization of neuronal morphology based on three-dimensional shape restrictions
Fragment | Ground truth (μm) | Original (μm) | Optimized (μm) | Difference (μm) | Difference /Original | |
|---|---|---|---|---|---|---|
Helix curve | 197.62 | 186.41 | 204.71 | 18.30 | 9.81% | |
VIS | Axon #1 | none | 3970.93 | 4110.62 | 139.69 | 3.52% |
Axon #2 | 1244.10 | 1264.30 | 20.20 | 1.62% | ||
Axon #3 | 952.25 | 980.22 | 27.97 | 2.94% | ||
Dendrite #1 | 372.70 | 390.53 | 17.83 | 4.78% | ||
Dendrite #2 | 115.55 | 119.05 | 3.50 | 3.03% | ||
MC | Axon #1 | none | 5320.15 | 5536.82 | 216.67 | 4.07% |
Axon #2 | 1965.80 | 2044.52 | 78.72 | 4.00% | ||
Axon #3 | 2372.94 | 2404.79 | 31.85 | 1.34% | ||
Axon #4 | 3449.51 | 3623.17 | 173.66 | 5.03% | ||
Dendrite #1 | 161.07 | 176.61 | 15.54 | 9.65% | ||
Dendrite #2 | 156.35 | 157.24 | 0.89 | 0.57% | ||