From: IonCRAM: a reference-based compression tool for ion torrent sequence files
File | Bam Size (GB) | CRAM Size (GB) | Scramble CRAM %saving of flow signal compared to BAM | Overall Scramble CRAM %Saving w.r.t. BAM | Naïve (Scramble + XZ/Zstd) | %saving Naïve | IonCRAM Size (GB) | IonCRAM %saving of flow signal compared to BAM | Overall IonCRAM %Saving w.r.t. BAM | Improvement over CRAM |
---|---|---|---|---|---|---|---|---|---|---|
Gene Panels | ||||||||||
Average values for Gene Panels | 1.55 | 1.02 | 33.03% | 34.36% | 1.28 | 17.11% | 0.89 | 45.09% | 42.60% | 8.24% |
Min values for Gene Panels | 1.02 | 0.67 | 32.82% | 34.00% | 0.85 | 16.77% | 0.59 | 44.73% | 42.39% | 7.46% |
Max values for Gene Panels | 2.76 | 1.82 | 33.23% | 35.00% | 2.28 | 17.44% | 1.59 | 45.67% | 42.90% | 8.90% |
In house Exomes | ||||||||||
Average values for In house Exomes | 57.07 | 36.85 | 33.37% | 35.33% | 48.61 | 18.19% | 32.17 | 45.36% | 43.59% | 8.31% |
Min | 53.64 | 34.34 | 33.06% | 35% | 44.51 | 13.89% | 30.31 | 44.97% | 43.37% | 7.49% |
Max | 60.25 | 38.87 | 33.61% | 36% | 51.88 | 22.36% | 34.12 | 45.94% | 43.90% | 9.06% |
Public Standard Exomes | ||||||||||
Average values for public Exomes | 42.39 | 29.01 | 29.05% | 31.75% | 36.57 | 13.71% | 25.445 | 41.71% | 39.84% | 8.09% |
Min | 25.11 | 17.12 | 29.01% | 31% | 21.75 | 13.33% | 14.99 | 41.34% | 39.7% | 7.80% |
Max | 50.60 | 34.67 | 29.09% | 32% | 43.72 | 14.55% | 30.35 | 41.92% | 40.0% | 8.70% |