Skip to main content

Table 2 Cell type properties (set by config file)

From: Cells in Silico – introducing a high-performance framework for large-scale tissue modeling

Parameter Description
V0 Target volume
S0 Target surface
λV Volume coupling factor
λS Surface coupling factor
Ai,j Adhesion coupling matrix
Size change constant rate of change of V0 and S0
Diffusion matrix Diffusion constant matrix
Signal decay Signal decay per time-step (relative and absolute)
Constant signal Has constant signal
Start signal Cells of this type are initiated with the signal content
Division  
Rate Division rate
Age Minimum division age
Signal thresholds Minimum and maximum signal value
Mutation matrix Probability to mutate to another type
Cell death  
Apoptotic cell type Cell type of the apoptotic cells
Rate Cell death rate
Age Minimum cell age
Signal thresholds Minimum and maximum signal value