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Table 1 Benchmarking of SAPPHIRE against online available promoter prediction tools

From: SAPPHIRE: a neural network based classifier for σ70 promoter prediction in Pseudomonas

  Test set Complete dataset
Tool Sensitivity Specificity Sensitivity Specificity
BPROM 23.5% 78.8% 18.8% 79.9%
CNNPromoter_b 23.5% 86.9% 18.8% 87.2%
SAPPHIRE 88.2% 82.9% 87.1% 82.0%
  1. Sensitivity and specificity for each tool and both the test set and complete dataset.