Table 5 CAMI low-complexity dataset assembly results with MetaVelvet models trained with a dataset generated from mismatched reference genomes
From: MetaVelvet-DL: a MetaVelvet deep learning extension for de novo metagenome assembly
| Â | MetaVelvet-DL-Marmoset | MetaVelvet-SL-Marmoset |
|---|---|---|
N50 (> 500 bp) | 6732 | 6599 |
# Contigs (> 500 bp) | 23,188 | 23,299 |
Total contig length | 66,787,785 | 66,053,025 |
Misassembled contig length ratio | 2.17e-2 | 1.11e-2 |
Genome fraction (%) | 40.5 | 42.1 |
Total chimeric contig length | 15,671,826 (23.5%) | 17,648,716 (26.7%) |
Chimeric class accuracy | 11,543/26,315 (43.9%) | 7784/26,315 (29.6%) |