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Table 6 CAMI medium-complexity dataset assembly result with MetaVelvet models trained with training dataset generated from Kraken-predicted species genomes

From: MetaVelvet-DL: a MetaVelvet deep learning extension for de novo metagenome assembly

  MetaVelvet-DL MetaVelvet-SL Megahit
N50 (> 500 bp) 997 991 2682
# Contigs (> 500 bp) 47,931 47,917 106,769
Total contig length 77,284,835 77,094,128 242,383,239
Misassembled contig length ratio 8.69e-3 1.10e-2 2.39e-3
Genome fraction (%) 14.6 14.6 45.3
Total chimeric contig length 9,796,796 (12.7%) 9,606,278 (12.5%) 13,140,546 (18.0%)