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Table 1 The impact of input partitions

From: pmTM-align: scalable pairwise and multiple structure alignment with Apache Spark and OpenMP

Number of input partitions Total execution time Average execution time per pair
Subset100 Subset400 Subset1600 Subset100 Subset400 Subset1600
Default (2) 25.54 42.29 97.28 0.25 0.11 0.06
64 22.61 22.12 26.41 0.22 0.06 0.02
128 21.57 23.95 25.69 0.22 0.06 0.02
256 22.93 23.69 25.6 0.23 0.06 0.02
  1. Total execution time (in s) and average execution time per pair (in s) are computed for 1-to-all PSA tests