Skip to main content

Table 4 Selected variants for SKCM in case of using \(\hbox {DCFS-}D_2\) at \(D_1 = 50\)

From: Feature selection algorithm based on dual correlation filters for cancer-associated somatic variants

CHR

START

REF

ALT

GENE

HPO

KEGG

COSMIC

1

190098828

C

T

BRINP3

  

COSM1689444

2

37231652

G

A

NDUFAF7

 

ko04714

 

2

137450953

G

A

THSD7B

   

2

178756687

C

T

TTN

OMIM:604145; OMIM:608807; ORPHA:169186; OMIM:600334; OMIM:611705; OMIM:613765; OMIM:603689; ORPHA:324604; ORPHA:609

ko05410; ko05414; H00292; H00294; H00593; H00594; H01976

 COSM1482258; COSM1482259; COSM1482261; COSM1482257; COSM1482260

4

137531580

G

A

PCDH18

  

COSM3428175

5

13753490

G

A

DNAH5

ORPHA:244; OMIM:608644

 

COSM1695413

6

56067320

C

T

COL21A1

  

COSM1445258; COSM1445259

8

76852088

C

T

ZFHX4

OMIM:178300

  

9

127937878

C

T

DPM2

ORPHA:329178; OMIM:615042

ko00510; ko00563; ko01100; H00118

 

11

55367976

G

A

OR4A15

  

COSM106310

11

61792641

G

A

FEN1

 

ko03030; ko03410; ko03450

 

15

64163030

G

A

PPIB

OMIM:259440

H00506

 

16

20032148

G

A

GPR139

  

COSM967969

19

45691963

C

T

SNRPD2

 

ko03040

 

19

45691983

C

T

SNRPD2

 

ko03040

 

20

35542046

G

A

ERGIC3

   

20

42098471

C

T

PTPRT

  Â