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Table 5 Selected variants for BRCA in case of using \(\hbox {DCFS-}D_2\) at \(D_1 = 50\)

From: Feature selection algorithm based on dual correlation filters for cancer-associated somatic variants

CHR START REF ALT GENE HPO KEGG COSMIC
1 43305332 G T TIE1    COSM3805284; COSM3805283
2 46576099 C G RHOQ   ko04910  
2 131528196 G C CCDC74A    COSM1752030
2 178562952 G C TTN OMIM:604145; OMIM:608807; ORPHA:169186; OMIM:600334; OMIM:611705; OMIM613765; OMIM:603689; ORPHA:324604; ORPHA:609 ko05410; ko05414; H00292; H00294; H00593; H00594; H01976 COSM1482258; COSM1482259; COSM1482261; COSM1482257; COSM1482260
3 37347240 G A GOLGA4    COSM1044027
5 31401487 C A LVRN    
5 36152895 G T SKP2   ko04068; ko04110; ko04120; ko04150; ko05169; ko05200; ko05203; ko05222  
5 115983289 C G DROSHA   ko03008; ko05205 COSM3827928
6 47682558 G T ADGRF2    
6 83168072 A C DOPEY1    COSM3831123; COSM3831122
8 19405982 C T CSGALNACT1   ko00532; ko01100 COSM454271
10 50841872 A T A1CF    COSM3807316; COSM3807318; COSM3807317
11 78812245 T C TENM4 OMIM:616736   
14 19920797 G A OR4K5    COSM1663253
14 23386104 C A MYH6 OMIM:613251; OMIM:613252; OMIM:614089; OMIM:192600; ORPHA:154 ko04022; ko04260; ko04261 ko04919; ko05410; ko05414; ko05416; H00292; H00294; H00546; H00594; H00656; H00703; H01216; H01977 COSM1477478
14 67725248 C A ZC3H14 ORPHA:88616; OMIM:617125 H00768 COSM1477814
14 76831292 C T RDH12 ORPHA:791; ORPHA:65; OMIM:612712 ko00830; ko01100; H00837 COSM3815158
14 88572068 G C LRRC74A    COSM3815383
15 48168740 C A MYEF2    COSM1373221
17 37274266 G A ACACA OMIM:613933 ko00061; ko00254; ko00620;ko00640; ko01100; ko01110; ko01120; ko01130; ko01212; ko04152; ko04910; ko04922  
19 22304762 G A ZNF729    COSM439106
19 37635574 C T ZFP30    
19 39390264 C A ZNF575    COSM3823309
19 43534433 G A PAF1   ko04011 COSM3823010
20 44614698 G A PKIG    COSM443871