Integration of anatomy ontology data with protein–protein interaction networks improves the candidate gene prediction accuracy for anatomical entities

Table 2 The statistics for the unfiltered and filtered anatomy-based gene networks for zebrafish

	Lin method	Resnik method	Schlicker method	Wang method
Number of genes in the unfiltered network	5405	5405	5405	5405
Number of interactions in the unfiltered network	14,534,897	14,534,897	14,534,897	14,604,258
The gene similarity score cutoff	0.55	0.18	0.24	0.70
Number of genes in the filtered network	5387	4909	5401	5386
Number of interactions in the filtered network	700,138	712,286	692,539	789,282

ISSN: 1471-2105