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Table 10 Statistics of the impact of concurrency on the memory usage of RepAHR when processing the Human-r14 dataset

From: RepAHR: an improved approach for de novo repeat identification by assembly of the high-frequency reads

Species

Method

THREAD

CPU time (s)

Virtual memory (kb)

\(Homo \ sapiens\) chr14

 

10

4880.97

9,552,936

RepAHR

20

4706.87

9,566,604

30

4671.14

19,789,184

40

4354.44

24,886,024

  1. The parameter THREAD is used to set the number of threads when the program runs in parallel