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Table 7 The ratios of segments in RepBase library covered by the repetitive sequences generated by each tools (The coverage ratios are calculated by BLAST)

From: RepAHR: an improved approach for de novo repeat identification by assembly of the high-frequency reads

Metrics Method > 50% > 70% > 90%
BCR RepARK CLC 87 57 33
RepARK Velvet 84 42 24
REPdenovo 19 15 7
RepAHR 173 116 69
MCR RepARK CLC 155 115 64
RepARK Velvet 218 187 149
REPdenovo 22 19 13
RepAHR 241 206 161
  1. ’BCR’ indicates the best coverage ratio, ’MCR’ indicates the maximum coverage ratio