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Table 8 The comparison of CPU time and virtual memory consumption of these three tools when using default parameters to process these five datasets

From: RepAHR: an improved approach for de novo repeat identification by assembly of the high-frequency reads

Species RepARK [CPU time (s)/virtual memory (kb)] REPdenovo [CPU time (s)/virtual memory (kb)] RepAHR [CPU time (s)/virtual memory (kb)]
Drosophila melanogaster 1387.63/9,546,368 4,896.98/13,223,216 4441.25/11,333,456
Saccharomyces cerevisiae 770.96/4,887,024 12,846.08/48,140,200 2,429.36/4,921,672
Acromyrmex echinatior 3198.22/18,730,776 18,747.07/25,592,284 20,245.73/20,513,324
Human chr14 1313.54/4887,452 6,397.10/5,878,436 4,354.44/24,886,024
Musmusculus 9654.50/37,149,572 52,624.49/133,352,464 606,338.15/2,608,150,044