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Fig. 4 | BMC Bioinformatics

Fig. 4

From: Identification of CD8+ T cell epitopes through proteasome cleavage site predictions

Fig. 4

Predicted SARS-CoV-2-specific CD8+ T cell epitopes using iPCPS. a The figure represents the number of predicted CD8+ T cell epitopes in SARS-CoV-2 proteome using iPCPS with different settings indicated in the abscissa: 9-mer, total 9-mer peptides in the SARS-CoV-2 proteome; IP, immunoproteasome model; IP w/o, immunoproteasome model discarding peptides with internal cleavage sites; IP + P, immunoproteasome and proteasome models; IP + P w/o, immunoproteasome and proteasome models discarding peptides with internal cleavage sites. b Percentage of SARS-CoV-2 CD8+ T cell epitopes predicted by peptide-HLA I binding predictions reported by Grifoni et al. [31] included in those anticipated by iPCPS with settings indicated in panel A

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