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Table 2 Number of features picked and matched with standard mixture data sets using different tools

From: IP4M: an integrated platform for mass spectrometry-based metabolomics data mining

Tool Number of total features Number of true features Time spent (h)
LC–MS
 IP4M (metaMS) 5150 76 0.5
 W4M 4102 68 0.5
 Galaxy-M 6021 74 0.5
 XCMSonline 6339 79 0.6
 MZmine2 3033 81 1.5
 MetaboanalystR 5386 84 2.0
 Metaboseek 3863 112 0.5
 MS-DIAL 6765 89 4.0
GC–MS
 IP4M/W4M (metaMS) 84 27 1.3
 IP4M (eRah) 188 33 1.0
 MS-DAIL 241 25 0.5
 MZmine2 (ADAP) 130 28 2.0
  1. The computer used: Windows 10, CPU = 3.4 GHz, 4 cores, and RAM = 16 GB