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Table 1 Predicotors of LGG SPM gene-level (all genes) model and fitting results of Cox models

From: Cancer prognosis prediction using somatic point mutation and copy number variation data: a comparison of gene-level and pathway-based models

  Multivariable Cox model Univariable Cox model
Hazard ratios se(coef) p value Hazard ratios se(coef) p value
PDGFRA 29.73 0.49 5.47E−12 24.49 0.48 2.66E−11
IDH1 0.28 0.22 5.68E−09 0.25 0.18 5.93E−14
EGFR 4.17 0.29 6.15E−07 5.05 0.25 1.23E−10
KALRN 0.22 1.04 1.46E−01 0.15 1.02 6.76E−02
TNR 0.00 2402.16 9.90E−01 2.91E−08 2560.82 9.95E−01
GALNT12 0.00 1249.74 9.90E−01 0.20 1.03 1.23E−01
SERINC3 0.00 2402.16 9.90E−01 2.91E−08 2560.82 9.95E−01
TMX4 0.00 2235.75 9.94E−01 9.57E−08 1683.51 9.92E−01
CDK19 0.00 7374.16 9.98E−01 3.29E−08 2381.56 9.94E−01
TMEM82 1.61 7732.63 1.00E+00 3.21E−08 2611.31 9.95E−01
TWISTNB 1 0 NA 2.91E−08 2560.82 9.95E−01
UTP6 1 0 NA 0.20 1.03 1.23E−01
ACTL8 1 0 NA 2.91E−08 2560.82 9.95E−01
TLR3 1 0 NA 2.91E−08 2560.82 9.95E−01
PPP1R16B 1 0 NA 3.21E−08 2611.31 9.95E−01
FLAD1 1 0 NA 2.91E−08 2560.82 9.95E−01