Table 2 Clustering of the cytometries in \(\mathcal {DB}\) obtained using optimalFlowTemplates with complete linkage hierarchical clustering looking for 7 clusters and using HDBSCAN
From: optimalFlow: optimal transport approach to flow cytometry gating and population matching
ID | Cytometry | Cluster | |
|---|---|---|---|
Comp.-Link. | HDBSCAN | ||
1 | \({\mathcal {C}}^{1}\) | 1 | 1 |
2 | \({\mathcal {C}}^{3}\) | 2 | 6 |
3 | \({\mathcal {C}}^{4}\) | 2 | 6 |
4 | \({\mathcal {C}}^{6}\) | 2 | 6 |
5 | \({\mathcal {C}}^{8}\) | 2 | 6 |
6 | \({\mathcal {C}}^{10}\) | 1 | 8 |
7 | \({\mathcal {C}}^{11}\) | 1 | 9 |
8 | \({\mathcal {C}}^{12}\) | 1 | 8 |
9 | \({\mathcal {C}}^{13}\) | 1 | 9 |
10 | \({\mathcal {C}}^{16}\) | 3 | 6 |
11 | \({\mathcal {C}}^{19}\) | 3 | 7 |
12 | \({\mathcal {C}}^{20}\) | 3 | 7 |
13 | \({\mathcal {C}}^{21}\) | 4 | 7 |
14 | \({\mathcal {C}}^{22}\) | 4 | 2 |
15 | \({\mathcal {C}}^{23}\) | 4 | 2 |
16 | \({\mathcal {C}}^{24}\) | 4 | 2 |
17 | \({\mathcal {C}}^{25}\) | 4 | 2 |
18 | \({\mathcal {C}}^{28}\) | 5 | 3 |
19 | \({\mathcal {C}}^{30}\) | 6 | 4 |
20 | \({\mathcal {C}}^{32}\) | 6 | 4 |
21 | \({\mathcal {C}}^{33}\) | 6 | 4 |
22 | \({\mathcal {C}}^{34}\) | 5 | 3 |
23 | \({\mathcal {C}}^{35}\) | 7 | 3 |
24 | \({\mathcal {C}}^{36}\) | 6 | 5 |
25 | \({\mathcal {C}}^{37}\) | 6 | 5 |
26 | \({\mathcal {C}}^{38}\) | 6 | 5 |
27 | \({\mathcal {C}}^{39}\) | 6 | 5 |