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Table 2 Characterization of the eight published scRNA-seq data sets

From: Impact of data preprocessing on cell-type clustering based on single-cell RNA-seq data

Data sets

# Cells

# Genes

# Cell types

# Units

Darmanis

466

22,088

9

CPM

Lake

3042

25,051

16

TPM

Yan

90

20,214

6

RPKM

Romanov

2881

24,341

7

READS

Baron-5000

5000

20,125

14

READS

Biase

56

25,734

4

FPKM

Deng

268

22,431

6

RPKM

Leng

460

19,084

4

QN