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Fig. 3 | BMC Bioinformatics

Fig. 3

From: simplePHENOTYPES: SIMulation of pleiotropic, linked and epistatic phenotypes

Fig. 3

Boxplot of running time, in seconds, required by simplePHENOTYPES to simulate 1, 000 experiments (i.e., replicate traits) under the single trait, pleiotropy, partial pleiotropy, and spurious pleiotropy scenarios. In the latter three scenarios, two traits were simulated for each experiment. This simulation was conducted on a single core of a 2.4 GHz MacBook with 64 GB of RAM. The data set used contained 10, 650 SNPs in numerical format genotyped on 280 maize individuals. The symbol \(``+''\) denotes the mean running time of each simulated architecture

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