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Table 2 AUC-ROC values for spurious PPI prediction

From: Graph embeddings on gene ontology annotations for protein–protein interaction prediction

Onto Model Human Mouse Yeast
BP Resnik 0.8243 0.7935 0.7917
Lin 0.7758 0.7514 0.7572
Jang and Conrath 0.7494 0.7427 0.7348
simGIC 0.7965 0.7638 0.7823
Onto2Vec 0.8426 0.8167 0.8051
GOA2Vec (cos) 0.8613 0.8207 0.8324
GOA2Vec (mhd) 0.8725 0.8439 0.8467
GOA2Vec (svm) 0.8809 0.8613 0.8654
CC Resnik 0.7827 0.7758 0.8016
Lin 0.7334 0.7364 0.7452
Jang and Conrath 0.7157 0.7296 0.7291
simGIC 0.7608 0.7710 0.7776
Onto2Vec 0.8016 0.7913 0.7935
GOA2Vec (cos) 0.8191 0.8142 0.8117
GOA2Vec (mhd) 0.8360 0.8207 0.8254
GOA2Vec (svm) 0.8415 0.8427 0.8394
MF Resnik 0.7903 0.7817 0.7834
Lin 0.7317 0.7298 0.7265
Jang and Conrath 0.7186 0.7215 0.7184
simGIC 0.7636 0.7716 0.7716
Onto2Vec 0.8137 0.7903 0.8216
GOA2Vec (cos) 0.8116 0.8134 0.8177
GOA2Vec (mhd) 0.8209 0.8275 0.8194
GOA2Vec (svm) 0.8367 0.8416 0.8385
  1. GO refers to the ontology used