Table 6 Statistics of the ground-truth PPI datasets as well as removed PPIs (“Re-PPI”) and added PPIs (“Ad-PPI”)
From: Graph embeddings on gene ontology annotations for protein–protein interaction prediction
Dataset | #Protein | #PPI | #Re-PPI | #Ad-PPI |
|---|---|---|---|---|
HUMAN | 6966 | 1,784,108 | 500,000 | 500,000 |
MOUSE | 16,105 | 7,515,864 | 500,000 | 500,000 |
YEAST | 2851 | 456,936 | 100,000 | 100,000 |