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Table 2 The results of feature selection for H. sapiens

From: m5CPred-SVM: a novel method for predicting m5C sites of RNA

Feature subset KS BC Sn (%) Sp (%) Pre (%) Acc (%) Mcc F1score AUC
PSNP 1 32 81.5 81.0 81.1 81.3 0.625 0.813 0.879
5SPSDP 0.25 8 82.5 77.5 78.6 80.0 0.601 0.805 0.862
CPD 8 0.25 81.0 76.5 77.5 78.8 0.576 0.792 0.850
5SNPF 0.25 4 73.5 79.5 78.2 76.5 0.531 0.758 0.802
PseDNC 1 4096 74.0 73.0 73.3 73.5 0.470 0.736 0.790
4NF 0.125 0.5 55.5 88.5 82.8 72.0 0.466 0.665 0.783
PSNP + 4NF 1 16 83.5 80.0 80.7 81.8 0.635 0.821 0.893
PSNP + 5SNPF 1 32 81.0 80.5 80.6 80.8 0.615 0.808 0.882
PSNP + 5SPSDP 2 32 82.5 81.0 81.3 81.8 0.635 0.819 0.885
PSNP + PseDNC 0.5 0.25 87.5 70.5 74.8 79.0 0.589 0.806 0.854
PSNP + CPD 8 0.25 82.0 75.5 77.0 78.8 0.576 0.794 0.850
PSNP + 4NF + 5SNPF 1 16 85.5 79.5 80.7 82.5 0.651 0.830 0.897
PSNP + 4NF + 5SPSDP 1 8 82.5 82.5 82.5 82.5 0.650 0.825 0.895
PSNP + 4NF + CPD 8 0.25 82.0 75.5 77.0 78.8 0.576 0.794 0.850
PSNP + 4NF + PseDNC 1 16 80.5 78.5 78.9 79.5 0.590 0.797 0.873
PSNP + 4NF + 5SNPF + 5SPSDP 1 8 81.5 80.5 80.7 81.0 0.620 0.811 0.896
PSNP + 4NF + 5SNPF + CPD 64 16 84.0 73.0 75.7 78.5 0.573 0.796 0.854
PSNP + 4NF + 5SNPF + PseDNC 1 16 85.5 80.0 81.0 82.8 0.656 0.832 0.899
PSNP + 4NF + 5SNPF + PseDNC + CPD 64 16 84.0 73.0 75.7 78.5 0.573 0.796 0.854
PSNP + 4NF + 5SNPF + PseDNC + 5SPSDP 1 8 81.5 81.5 81.5 81.5 0.630 0.815 0.897