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Table 4 The results of feature selection for A. thaliana

From: m5CPred-SVM: a novel method for predicting m5C sites of RNA

Feature subset KS BC Sn (%) Sp (%) Pre (%) Acc (%) Mcc F1score AUC
PseDNC 0.125 0.25 59.4 80.6 75.4 70.0 0.410 0.665 0.760
4NF 0.125 1 62.3 76.3 72.4 69.3 0.389 0.670 0.759
CPD 16 16 61.1 78.4 73.9 69.8 0.401 0.669 0.753
1SNPF 0.25 0.125 57.7 81.0 75.2 69.4 0.398 0.653 0.753
PSNP 0.5 32 55.8 78.1 71.8 66.9 0.347 0.628 0.724
3SPSDP 0.0625 1 58.2 72.4 67.8 65.3 0.309 0.626 0.694
PseDNC + 1SNPF 0.25 0.25 61.5 78.8 74.4 70.1 0.409 0.673 0.759
PseDNC + PSNP 1 64 60.0 80.6 75.7 70.5 0.419 0.672 0.769
PseDNC + 3SPSDP 0.25 2 63.4 78.7 74.9 71.1 0.426 0.686 0.773
PseDNC + 4NF 0.25 1 61.0 79.7 75.0 70.3 0.414 0.673 0.763
PseDNC + CPD 16 16 61.0 78.7 74.1 69.7 0.404 0.669 0.753
PseDNC + 3SPSDP + 4NF 0.25 1 65.1 77.3 74.2 71.2 0.427 0.693 0.777
PseDNC + 3SPSDP + 1SNPF 0.25 0.5 65.2 77.3 74.1 71.2 0.428 0.694 0.776
PseDNC + 3SPSDP + PSNP 0.25 1 64.1 76.8 73.4 70.4 0.412 0.684 0.768
PseDNC + 3SPSDP + CPD 16 16 61.0 78.8 74.2 69.9 0.404 0.670 0.753
PseDNC + 3SPSDP + 4NF + 1SNPF 0.5 2 64.9 78.1 74.7 71.5 0.433 0.695 0.779
PseDNC + 3SPSDP + 4NF + PSNP 0.5 2 63.5 78.5 74.7 71.0 0.424 0.686 0.772
PseDNC + 3SPSDP + 4NF + CPD 16 16 61.0 78.8 74.2 69.9 0.404 0.670 0.755
PseDNC + 3SPSDP + 4NF + 1SNPF + PSNP 0.25 0.5 68.1 75.5 73.5 71.8 0.437 0.707 0.782
PseDNC + 3SPSDP + 4NF + 1SNPF + CPD 16 16 61.1 78.9 74.3 70.0 0.406 0.670 0.756
PseDNC + 3SPSDP + 4NF + 1SNPF + PSNP + CPD 16 16 61.1 78.9 74.3 70.0 0.406 0.670 0.756