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Table 2 Performance comparisons of our method with other methods on the test set

From: An improved DNA-binding hot spot residues prediction method by exploring interfacial neighbor properties

Tools

SEN

SPE

PRE

F1

MCC

ACC

AUC

p value

inpPDH

0.731

0.816

0.731

0.731

0.547

0.781

0.833

#

PrPDH

0.692

0.816

0.720

0.706

0.511

0.766

0.764

4.130e−05

SAMPDI

0.654

0.658

0.567

0.607

0.307

0.656

0.690

8.772e−12

PremPDI

0.577

0.737

0.600

0.588

0.316

0.672

0.708

8.015e−08

mCSM-NA

0.538

0.737

0.583

0.560

0.279

0.656

0.661

1.988e−17

  1. The highest value in each column is shown in italics. #indicates the reference item for calculating the p value with other methods
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BMC Bioinformatics

ISSN: 1471-2105

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