Skip to main content
Fig. 1 | BMC Bioinformatics

Fig. 1

From: In silico trial to test COVID-19 candidate vaccines: a case study with UISS platform

Fig. 1

SARS-CoV-2 disease model implemented in UISS. Main compartments (lung, and lymph-nodes) are delimited with dashed lines. Peripheral blood compartment is seen as connecting duct, not explicitly represented. The starting point is the SARS-CoV-2 droplets entrance in the upper respiratory tract (not shown). Then, all the main infection dynamics is described. The immune system cascade is shown as it was implemented, based on the latest research results published in specialized literature. For each entity, the localization (i.e., the biological compartment in which the entities are present) and the status (i.e., the differentiation states that an entity can own) are defined. The results of the immune system mounting process is the killing of the infected lung epithelial cells by the cytotoxic T lymphocyte and the local release of both chemokine factors and cytokines. At the humoral level, specific IgM (first) and IgG (after) directed against SARS-CoV-2 virus are released by plasma B cells. Regulatory system is also involved in the process. If the immune system machinery works correctly, regulatory arm shutdowns excessive cytokines storm, avoiding the severe prognosis of COVID-19. All entities are allowed to move with a uniform probability between neighboring lattices in the grid with an equal diffusion coefficient (Brownian motion). If a chemokines gradient is present, then to mimic short-range chemotaxis effects, higher probabilities of being chosen are given to sites containing chemokines

Back to article page