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Table 9 Compared with existing methods on PDB1075 data set (LOOCV)

From: A sequence-based multiple kernel model for identifying DNA-binding proteins

Methods

ACC (%)

MCC

SN (%)

Spec (%)

IDNA-Prot|dis

77.30

0.54

79.40

75.27

PseDNA-Pro

76.55

0.53

79.61

73.63

IDNA-Prot

75.40

0.50

83.81

64.73

DNA-Prot

72.55

0.44

82.67

59.76

DNAbinder

73.95

0.48

68.57

79.09

iDNAPro-PseAAC

76.56

0.53

75.62

77.45

Kmer1+ACC

75.23

0.50

76.76

73.76

Local-DPP

79.10

0.59

84.80

73.60

MKSVM-HKA

81.30

0.63

82.29

80.36

MSFBinder

83.35

0.67

83.62

83.09

FKRR-MVSF

83.26

0.67

85.71

80.91

Our method (MKSVM with MKL-CKA)

84.19

0.68

85.91

82.55

  1. The bold font indicates the largest value in the column