Table 2 Attributes describing a GMO element from the EUginius GMO genetic element thesaurus
Fieldname | Description | Example |
|---|---|---|
id | Unique thesaurus ID | e: 0000415 |
Name | Naming convention described in text | CS-bar-STRHY |
Relation | Description of type of relation and ID and name of the parent term | is_a: e: 0000188! CS-phosphinothricin N-acetyltransferase |
Definition | Definition of the element, including references to the source of the information | Phosphinothricin acetyltransferase gene derived from the common soil bacterium Streptomyces hygroscopicus a.k.a. bar gene shares 85 per cent homology at the amino acid level with the pat gene. Thompson et al. (1987) EMBO J. 6:2519–2523 |
Comment | The function of this element, including references to the source of the information | Acetylates the primary amino group of L-phosphinothricin (L-PPT; a.k.a. glufosinate) rendering it inactive. Wehrmann et al. (1996) Nat Biotechnol. 14:1274–1278; ENV/JM/MONO(99) 13:1–26 |
Synonyms | Non-standard names | Bialaphos resistance, PAT |
Trait | Which phenotypic trait does it influence, consists of link to a trait thesaurus (the EUginius trait thesaurus) | xref: Trait:t\:0000006 Herbicide tolerance > Glufosinate tolerance |
Other_ids | Relevant IDs from BCH, JRC or other databases | xref: BCH:14972 xref: Donor: Streptomyces hygroscopicus |