Table 2 Comparison between propedia and other protein–peptide complex databases
From: Propedia: a database for protein–peptide identification based on a hybrid clustering algorithm
Name | # of complexes | Peptide length (aa) | Resolution (Å) | Type | Availability |
|---|---|---|---|---|---|
Propedia | 19,813 | 2–50 | < 2.5 | Web server | \(\checkmark\) |
PepX | 1431 | 5–35 | < 2.5 | Web server | N.A. |
PeptiDB | 103 | 5–15 | < 2.0 | PDB IDs’ list | \(\checkmark\) |
PepBind | 5314 | \(\le\) 35 | N.A | Web server | N.A. |
PixelDB | 1966 | 5–50 | < 2.5 | GitHub | \(\checkmark\) |
PepBDB | 12,241 | < 50 | N.A | Web server | \(\checkmark\) |
PepPro | 1198 | 5–30 | < 2.5 | PDB IDs’ list | \(\checkmark\) |