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Table 1 Performance of DNMFilter_Indel used with three state-of-the-art de novo indel detection methods

From: Filtering de novo indels in parent-offspring trios

Approaches

Without filtering

DNMFilter_Indel without local assembly

DNMFilter_Indel with local assembly

Sensitivity (%)

Number

Sensitivity (%)

Number

Sensitivity (%)

Number

PhaseByTransmission

92

583

88

182

92

197

DenovoGear

84

217

80

114

84

122

TrioDeNovo

92

3267

88

328

92

325