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Table 3 Key indicators of ELMSI in different numbers number of mciro-satellites

From: Accurately estimating the length distributions of genomic micro-satellites by tumor purity deconvolution

Number of MSIs

Coverage

Accuracy

Recall

Precision

Gain

MCC

20

30 ×

0.5385

0.7000

0.7000

0.4000

-0.300

 

60 ×

0.4815

0.6500

0.6500

0.3000

-0.350

 

100 ×

0.4419

0.6333

0.5938

0.2000

-0.386

 

120 ×

0.5750

0.7667

0.6970

0.4333

-0.265

30

30 ×

0.5250

0.7000

0.6774

0.3667

-0.311

 

60 ×

0.5250

0.7000

0.6774

0.3667

-0.311

 

100 ×

0.6875

0.8250

0.8049

0.6250

-0.184

 

120 ×

0.6400

0.8000

0.7619

0.5500

-0.218

40

30 ×

0.6809

0.8000

0.8205

0.6250

-0.189

 

60 ×

0.5882

0.7500

0.7317

0.4750

-0.259

 

100 ×

0.5606

0.7400

0.6981

0.4200

-0.280

 

120 ×

0.4930

0.7000

0.6250

0.2800

-0.335

50

30 ×

0.6949

0.8200

0.8200

0.6400

-0.180

 

60 ×

0.7000

0.8400

0.8077

0.6400

-0.175

 

100 ×

0.6000

0.7500

0.7500

0.5000

-0.250

 

120 ×

0.5375

0.7167

0.6825

0.3833

-0.299

60

30 ×

0.6164

0.7500

0.7759

0.5333

-0.236

 

60 ×

0.6081

0.7500

0.7627

0.5167

-0.243

 

100 ×

0.6279

0.7714

0.7714

0.5429

-0.228

 

120 ×

0.5862

0.7286

0.7500

0.4857

-0.260

70

30 ×

0.5333

0.6857

0.7059

0.4000

-0.304

 

60 ×

0.4787

0.6429

0.6522

0.3000

-0.352

 

100 ×

0.5660

0.7500

0.6977

0.4250

-0.274

 

120 ×

0.5463

0.7375

0.6782

0.3875

-0.290

80

30 ×

0.6122

0.7500

0.7692

0.5250

-0.240

 

60 ×

0.5980

0.7625

0.7349

0.4875

-0.250

 

100 ×

0.5664

0.7111

0.7356

0.4556

-0.276

 

120 ×

0.5575

0.7000

0.7326

0.4444

-0.283

90

30 ×

0.4957

0.6444

0.6824

0.3444

-0.336

 

60 ×

0.5085

0.6667

0.6818

0.3556

-0.325

 

100 ×

0.4138

0.6000

0.5714

0.1500

-0.414

 

120 ×

0.6667

0.8000

0.8000

0.6000

-0.200

100

30 ×

0.6116

0.7400

0.7789

0.5300

-0.239

 

60 ×

0.5191

0.6800

0.6869

0.3700

-0.316

 

100 ×

0.6290

0.7800

0.7647

0.5400

-0.227

 

120 ×

0.5952

0.7500

0.7426

0.4900

-0.253