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Table 3 The statistical significance of genetic features selected by GenEpi in predicting patients with AD

From: GenEpi: gene-based epistasis discovery using machine learning

Selected SNPs (RSID)WeightOdds Ratioχ2-test
P-value
Genotype
Frequency
Gene
rs3130614_BB, rs41276317_AB3.1619.231.42E-090.0742MICBaTOB2
rs12095538_BB, rs2774308_AB2.417.696.87E-070.0824SYT6
rs12926153_AB, rs12922908_AA1.184.836.89E-070.1511CLEC16A
rs9652600_AB, rs12922908_AA0.944.836.89E-070.1511CLEC16A
rs9344977_BB, rs56148686_AB1.944.321.14E-060.1813BACH2
rs429358_AA−2.010.171.73E-060.5962APOE
rs56233035_AB, rs3678_AB2.2610.161.91E-060.0604CACNA1E
rs11675339_AA, rs2710687_AA2.323.943.55E-060.1923VSNL1
rs12189429_BB, rs6881360_AA1.364.343.65E-060.467ADAMTS12
rs12187423_BB, rs6881360_AA0.584.343.65E-060.467ADAMTS12
rs10831829_BB, rs12366151_AA3.489.504.90E-060.0577PARVA
rs2052573_BB, rs34580133_AB1.804.085.00E-060.1648LINC00299
rs2421701_AB, rs200512701_AB1.824.125.29E-060.1593TNKS2
rs769449_AA−1.190.168.42E-060.6648APOE
  1. The sign ‘a’ between two gene symbols indicates cross-gene epistasis