Skip to main content

Table 6 AUTPR@k computed using the new associations introduced in the new version of HMDD v3.2 as ground truth

From: Prediction of new associations between ncRNAs and diseases exploiting multi-type hierarchical clustering

  AUC TPR@k
LP-HCLUS-NoLP0.00000
ncPred0.01448
LP-HCLUS AVGLevel 10.01754
 Level 20.02663
 Level 30.01453
LP-HCLUS MAXLevel 10.03247
 Level 20.03423
 Level 30.03111
LP-HCLUS MINLevel 10.01846
 Level 20.02197
 Level 30.00962
LP-HCLUS ECLevel 10.00695
 Level 20.00527
 Level 30.00548
HOCCLUS2 AVGLevel 10.01750
 Level 20.00627
 Level 30.00962
HOCCLUS2 MAXLevel 10.01774
 Level 20.00763
 Level 30.00991
HOCCLUS2 MINLevel 10.01657
 Level 20.00627
 Level 30.00962
HOCCLUS2 ECLevel 10.01689
 Level 20.01269
 Level 30.01252
  1. The best result is highlighted in boldface.