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Table 2 Pathways retained at different coverage thresholds

From: IPCO: Inference of Pathways from Co-variance analysis

KEGG coverage thresholdTotal< 0.010.01–0.1> 0.1
Number of KEGG pathways118193069
MetaCyc coverage thresholdTotal< 0.430.43–0.99> 0.99
Number of MetaCyc pathways693173166354
  1. Number of KEGG and MetaCyc pathways identified at different coverage thresholds. Coverage thresholds are strongly correlated to the accuracy of the inferred pathway profiles