Table 2 Pathways retained at different coverage thresholds
KEGG coverage threshold | Total | < 0.01 | 0.01–0.1 | > 0.1 |
|---|---|---|---|---|
Number of KEGG pathways | 118 | 19 | 30 | 69 |
MetaCyc coverage threshold | Total | < 0.43 | 0.43–0.99 | > 0.99 |
Number of MetaCyc pathways | 693 | 173 | 166 | 354 |