Fig. 1
From: Visualizing metabolic network dynamics through time-series metabolomic data
Dynamic visualization of metabolomic data. We take metabolomic data as input and generates a dynamic animation of the data over time which enables the visualization of pool sizes for individually measured metabolites. Several different options are discussed in this article for the visualization of the data based on node size, color, and fill level. The method has been implemented in SBMLsimulator including an export function to save the resulting output in a video file. For creation of animation videos highlighted in Tables 1 and 2 post-processing steps are needed as descibed in the Supplementary Information