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Table 1 Primer pairs used in this study and the covered variable regions

From: Joining Illumina paired-end reads for classifying phylogenetic marker sequences

Primer pair

Forward/ reverse sequence

Covered variable region

27F/534R

AGAGTTTGATCCTGGCTCAG/ ATTACCGCGGCTGCTGG

V1-V3

357F/926R

CCTACGGGAGGCAGCAG/ CCGTCAATTCMTTTRAGT

V3-V5

341F/785R

CCTACGGGNGGCWGCAG/ GACTACHVGGGTATCTAATCC

V3-V4

341F/1062R

CCTACGGGNGGCWGCAG/ CRRCACGAGCTGACGAC

V3-V6

8F/785R

AGRGTTYGATYMTGGCTCAG/ TACHVGGGTATCTAAKCC

V1-V4

27F/1492R

AGRGTTYGATYMTGGCTCAG/ RGYTACCTTGTTACGACTT

V1-V9

  1. Note that he primer coordinates are adapted from the original references, which might apply different coordinate systems