Table 6 Statistics of clustering different types of our real MiSeq data into OTUs
From: Joining Illumina paired-end reads for classifying phylogenetic marker sequences
| Â | No. of reads | No. of OTUs | No. of reads mapped to OTUs | No. of confident OTUs | No. of reads in confident OTUs |
|---|---|---|---|---|---|
Merged | 1,738,393 | 153 | 1,526,567 | 103 | 1,431,993 |
Trimmed first | 3,559,206 | 395 | 2,542,518 | 268 | 2,327,060 |
Trimmed DJ | 3,559,206 | 344 | 2,479,548 | 250 | 2,459,159 |
Trimmed IO | 3,559,206 | 309 | 2,430,418 | 232 | 2,411,575 |