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Table 6 Statistics of clustering different types of our real MiSeq data into OTUs

From: Joining Illumina paired-end reads for classifying phylogenetic marker sequences

  No. of reads No. of OTUs No. of reads mapped to OTUs No. of confident OTUs No. of reads in confident OTUs
Merged 1,738,393 153 1,526,567 103 1,431,993
Trimmed first 3,559,206 395 2,542,518 268 2,327,060
Trimmed DJ 3,559,206 344 2,479,548 250 2,459,159
Trimmed IO 3,559,206 309 2,430,418 232 2,411,575
  1. Abbreviations: DJ Direct-joining, IO Inside-out