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Table 2 Karlin-Altschul statistics for the analyzed DNA sequences

From: Modeling of shotgun sequencing of DNA plasmids using experimental and theoretical approaches

Vector

K

λ

MSP score

MSP length (nt)

Number of dots (*106)

TOPO*

0.17

0.19

39.03

21

39.48

QE**

0.17

0.19

39.06

21

56.85

LEXSY***

0.16

0.18

41.55

24

13.85

  1. *-pCR™4-TOPO®; **- pQE-30-UA-mCHERRY-GFP; ***- pLEXSY-Ig-1; MSP-maximal-scoring segment pairs
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BMC Bioinformatics

ISSN: 1471-2105

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