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Fig. 2 | BMC Bioinformatics

Fig. 2

From: Investigation of sequence features of hinge-bending regions in proteins with domain movements using kernel logistic regression

Fig. 2

Propensities (Hinge Index, HI) of amino acids and p-values. The HI and p-value of each amino acid for the following datasets (the percentage sets the filtering level according to sequence identity; see Methods section for definitions): a Group1_90% b Group1_40% c Group1_20%. The amino acids have been sorted according to their HI values (blue lines). A negative HI value indicates an amino acid that disfavours hinge-bending regions and a positive value indicates an amino acid that favours them. The horizontal black broken line at HI = 0 indicates those with no preference. The light-brown bars indicate the p values

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BMC Bioinformatics

ISSN: 1471-2105

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